Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 AC012640.2-201ENST00000561606 901 ntBASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 AGAP10P-201ENST00000454844 2418 ntBASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC22CQ9BRL7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AKR1C7P-201ENST00000305623 895 ntBASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC093827.2-201ENST00000512654 315 ntBASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AL161645.1-201ENST00000622716 1255 ntBASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SEC22CQ9BRL7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 AC072061.1-201ENST00000569710 2234 ntBASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SEC22CQ9BRL7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms