Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 SIGLEC22P-201ENST00000599104 714 ntBASIC17.14■□□□□ 0.33
CDCA5Q96FF9 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
CDCA5Q96FF9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AC025183.3-201ENST00000623526 1482 ntBASIC17.13■□□□□ 0.33
CDCA5Q96FF9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 OR8T1P-201ENST00000421347 918 ntBASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AC018638.5-201ENST00000450885 754 ntBASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 AL136172.1-201ENST00000598590 1394 ntBASIC17.13■□□□□ 0.33
CDCA5Q96FF9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDCA5Q96FF9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 AL672207.1-201ENST00000328462 1570 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 PYY2-201ENST00000315776 282 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 AC108734.2-201ENST00000420887 1069 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 RNA5SP406-201ENST00000516106 112 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 RN7SL665P-201ENST00000578793 300 ntBASIC17.12■□□□□ 0.33
CDCA5Q96FF9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCA5Q96FF9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms