Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AC113347.1-201ENST00000413321 391 ntBASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AL513480.1-201ENST00000451731 511 ntBASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CXCL1P1-201ENST00000502804 216 ntBASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 MIR6074-201ENST00000612054 107 ntBASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CICP1-201ENST00000416803 2410 ntBASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.89□□□□□ -0.67
CHCHD1Q96BP2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AC005332.1-201ENST00000577698 1310 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 VENTXP1-201ENST00000569334 2716 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AL391647.1-201ENST00000395664 511 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 KRT16P4-201ENST00000453883 522 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AC009474.1-201ENST00000455096 1565 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AC099336.1-202ENST00000602961 463 ntBASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.88□□□□□ -0.67
CHCHD1Q96BP2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms