Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.91□□□□□ -0.18
TUBA1AQ71U36 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MIR661-201ENST00000384842 89 ntBASIC13.9□□□□□ -0.18
TUBA1AQ71U36 EEF1DP4-201ENST00000446006 880 ntBASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SPDYE18-201ENST00000510091 1050 ntBASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MIR4745-201ENST00000577608 62 ntBASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 AC004840.1-201ENST00000636359 365 ntBASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1AQ71U36 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
TUBA1AQ71U36 AC018529.2-202ENST00000611482 3087 ntBASIC13.89□□□□□ -0.19
TUBA1AQ71U36 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 AL591122.2-201ENST00000624125 1853 ntBASIC13.89□□□□□ -0.19
TUBA1AQ71U36 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1AQ71U36 AC236430.1-201ENST00000402231 743 ntBASIC13.89□□□□□ -0.19
TUBA1AQ71U36 FO393414.2-201ENST00000405153 598 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms