Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 CYMP-203ENST00000474680 1263 ntBASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM53Q6P2H8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM53Q6P2H8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AL512361.1-201ENST00000554200 418 ntBASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AC010336.2-201ENST00000564226 506 ntBASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 MIR4313-201ENST00000580760 101 ntBASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM53Q6P2H8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms