Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 SNX29P1-201ENST00000548357 1007 ntBASIC13.7□□□□□ -0.22
LTBQ06643 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.7□□□□□ -0.22
LTBQ06643 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 BX539320.1-201ENST00000623759 877 ntBASIC13.7□□□□□ -0.22
LTBQ06643 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.7□□□□□ -0.22
LTBQ06643 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 AC023090.2-201ENST00000625182 2110 ntBASIC13.7□□□□□ -0.22
LTBQ06643 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LTBQ06643 AC020907.1-201ENST00000616460 1350 ntBASIC13.7□□□□□ -0.22
LTBQ06643 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.7□□□□□ -0.22
LTBQ06643 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.7□□□□□ -0.22
LTBQ06643 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 MYCLP2-201ENST00000449268 967 ntBASIC13.69□□□□□ -0.22
LTBQ06643 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 ELK1P1-201ENST00000485699 580 ntBASIC13.69□□□□□ -0.22
LTBQ06643 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 AP001582.1-201ENST00000525856 295 ntBASIC13.69□□□□□ -0.22
LTBQ06643 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.69□□□□□ -0.22
LTBQ06643 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.69□□□□□ -0.22
LTBQ06643 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LTBQ06643 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LTBQ06643 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.69□□□□□ -0.22
LTBQ06643 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTBQ06643 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
LTBQ06643 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LTBQ06643 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms