Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 AP001002.3-201ENST00000623482 206 ntBASIC12.49□□□□□ -0.41
RIPPLY3P57055 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.49□□□□□ -0.41
RIPPLY3P57055 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
RIPPLY3P57055 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.48□□□□□ -0.41
RIPPLY3P57055 RPL8P2-201ENST00000430538 502 ntBASIC12.48□□□□□ -0.41
RIPPLY3P57055 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 FAM8A4P-201ENST00000435433 1213 ntBASIC12.48□□□□□ -0.41
RIPPLY3P57055 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC110057.1-201ENST00000636031 898 ntBASIC12.48□□□□□ -0.41
RIPPLY3P57055 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 AC116353.5-201ENST00000638148 1699 ntBASIC12.48□□□□□ -0.41
RIPPLY3P57055 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RIPPLY3P57055 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RIPPLY3P57055 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 AC106881.1-201ENST00000605849 3329 ntBASIC12.47□□□□□ -0.41
RIPPLY3P57055 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.47□□□□□ -0.41
RIPPLY3P57055 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.47□□□□□ -0.41
RIPPLY3P57055 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RIPPLY3P57055 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms