Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14□□□□□ -0.17
CDH12P55289 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14□□□□□ -0.17
CDH12P55289 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14□□□□□ -0.17
CDH12P55289 PON3-203ENST00000427422 894 ntTSL 3 BASIC14□□□□□ -0.17
CDH12P55289 AC055876.3-201ENST00000431496 288 ntBASIC14□□□□□ -0.17
CDH12P55289 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14□□□□□ -0.17
CDH12P55289 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14□□□□□ -0.17
CDH12P55289 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14□□□□□ -0.17
CDH12P55289 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14□□□□□ -0.17
CDH12P55289 AC008738.7-201ENST00000609744 511 ntBASIC14□□□□□ -0.17
CDH12P55289 AC138649.4-201ENST00000612222 287 ntBASIC14□□□□□ -0.17
CDH12P55289 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDH12P55289 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14□□□□□ -0.17
CDH12P55289 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CDH12P55289 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14□□□□□ -0.17
CDH12P55289 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14□□□□□ -0.17
CDH12P55289 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14□□□□□ -0.17
CDH12P55289 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 AL354702.1-201ENST00000442006 1960 ntBASIC14□□□□□ -0.17
CDH12P55289 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CDH12P55289 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CDH12P55289 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CDH12P55289 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH12P55289 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 CLK3P2-201ENST00000427566 1453 ntBASIC13.99□□□□□ -0.17
CDH12P55289 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 AL359881.3-201ENST00000602640 1721 ntBASIC13.99□□□□□ -0.17
CDH12P55289 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH12P55289 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH12P55289 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH12P55289 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.99□□□□□ -0.17
CDH12P55289 AC004066.1-201ENST00000502488 802 ntBASIC13.99□□□□□ -0.17
CDH12P55289 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH12P55289 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH12P55289 AC135586.1-201ENST00000539323 574 ntBASIC13.99□□□□□ -0.17
CDH12P55289 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CDH12P55289 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 SRD5A3P1-201ENST00000603021 949 ntBASIC13.99□□□□□ -0.17
CDH12P55289 AL391069.4-201ENST00000609583 481 ntBASIC13.99□□□□□ -0.17
CDH12P55289 AC004840.1-201ENST00000636359 365 ntBASIC13.99□□□□□ -0.17
CDH12P55289 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH12P55289 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH12P55289 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 MST1P2-201ENST00000457982 2291 ntBASIC13.99□□□□□ -0.17
CDH12P55289 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH12P55289 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH12P55289 AC011474.4-201ENST00000623523 2076 ntBASIC13.99□□□□□ -0.17
CDH12P55289 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH12P55289 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH12P55289 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH12P55289 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms