Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CENPAP49450 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CENPAP49450 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CENPAP49450 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 KRT18P28-201ENST00000453838 1332 ntBASIC13.68□□□□□ -0.22
CENPAP49450 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 AC005252.3-201ENST00000623855 2258 ntBASIC13.68□□□□□ -0.22
CENPAP49450 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 AC092580.3-201ENST00000430932 139 ntBASIC13.68□□□□□ -0.22
CENPAP49450 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.68□□□□□ -0.22
CENPAP49450 AC241585.1-201ENST00000433527 519 ntBASIC13.68□□□□□ -0.22
CENPAP49450 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.68□□□□□ -0.22
CENPAP49450 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.68□□□□□ -0.22
CENPAP49450 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.68□□□□□ -0.22
CENPAP49450 DUX4L27-201ENST00000554796 1261 ntBASIC13.68□□□□□ -0.22
CENPAP49450 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.68□□□□□ -0.22
CENPAP49450 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.68□□□□□ -0.22
CENPAP49450 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.68□□□□□ -0.22
CENPAP49450 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.68□□□□□ -0.22
CENPAP49450 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.68□□□□□ -0.22
CENPAP49450 AL158211.3-201ENST00000607385 239 ntBASIC13.68□□□□□ -0.22
CENPAP49450 AC023511.2-201ENST00000618803 211 ntBASIC13.68□□□□□ -0.22
CENPAP49450 AL590560.3-201ENST00000623350 461 ntBASIC13.68□□□□□ -0.22
CENPAP49450 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 AC023908.3-201ENST00000564211 3047 ntBASIC13.68□□□□□ -0.22
CENPAP49450 REXO1L4P-201ENST00000605109 1937 ntBASIC13.68□□□□□ -0.22
CENPAP49450 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.68□□□□□ -0.22
CENPAP49450 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CENPAP49450 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.67□□□□□ -0.22
CENPAP49450 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 AL512638.1-201ENST00000457493 794 ntBASIC13.67□□□□□ -0.22
CENPAP49450 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.67□□□□□ -0.22
CENPAP49450 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms