Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AL359183.1-201ENST00000623796 2132 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC091951.1-201ENST00000512854 2465 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CEACAM3P40198 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.26□□□□□ -0.45
CEACAM3P40198 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC245100.3-201ENST00000441281 285 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 AC234783.1-201ENST00000441761 496 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 BCRP2-202ENST00000447763 634 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 BCRP6-201ENST00000510112 632 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 BCRP7-201ENST00000511549 544 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC106886.1-201ENST00000568660 600 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.26□□□□□ -0.45
CEACAM3P40198 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CEACAM3P40198 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 AL031595.1-201ENST00000623969 4709 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 AC018665.1-201ENST00000622927 1362 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.26□□□□□ -0.45
CEACAM3P40198 AL359258.3-201ENST00000622910 2331 ntBASIC12.26□□□□□ -0.45
CEACAM3P40198 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CEACAM3P40198 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CEACAM3P40198 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms