Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM23P36406 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM23P36406 LINC02228-204ENST00000642115 2962 ntBASIC14.67□□□□□ -0.06
TRIM23P36406 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 CICP23-201ENST00000605013 2741 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 LINC00528-201ENST00000600723 2160 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRIM23P36406 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 DPM3-202ENST00000368399 517 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 NKAIN1P1-201ENST00000435754 582 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 AL035414.1-201ENST00000451327 857 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM23P36406 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRIM23P36406 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.66□□□□□ -0.06
TRIM23P36406 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 AL451050.2-201ENST00000606967 682 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 AC027601.3-201ENST00000622907 509 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 AL139099.5-201ENST00000635274 300 ntBASIC14.66□□□□□ -0.06
TRIM23P36406 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM23P36406 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM23P36406 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM23P36406 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.66□□□□□ -0.06
TRIM23P36406 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM23P36406 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM23P36406 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM23P36406 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 CALR4P-201ENST00000431943 946 ntBASIC14.65□□□□□ -0.06
TRIM23P36406 CICP12-201ENST00000455801 843 ntBASIC14.65□□□□□ -0.06
TRIM23P36406 SCARNA20.5-201ENST00000516991 142 ntBASIC14.65□□□□□ -0.06
TRIM23P36406 AC044849.1-201ENST00000519737 1188 ntBASIC14.65□□□□□ -0.06
TRIM23P36406 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIM23P36406 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM23P36406 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 AC020914.3-201ENST00000594712 304 ntBASIC14.65□□□□□ -0.06
TRIM23P36406 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM23P36406 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRIM23P36406 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM23P36406 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRIM23P36406 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM23P36406 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM23P36406 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms