Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 AC093433.1-201ENST00000458048 571 ntBASIC12.84□□□□□ -0.35
CCL1P22362 TMEM198B-204ENST00000484016 896 ntBASIC12.84□□□□□ -0.35
CCL1P22362 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.84□□□□□ -0.35
CCL1P22362 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 AC004233.3-201ENST00000607794 1269 ntBASIC12.84□□□□□ -0.35
CCL1P22362 BX088702.1-201ENST00000610784 235 ntBASIC12.84□□□□□ -0.35
CCL1P22362 CU634019.7-201ENST00000624153 1185 ntBASIC12.84□□□□□ -0.35
CCL1P22362 FP236241.2-201ENST00000624906 1185 ntBASIC12.84□□□□□ -0.35
CCL1P22362 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 CLUHP2-201ENST00000426660 1303 ntBASIC12.84□□□□□ -0.35
CCL1P22362 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 KHSRPP1-201ENST00000427983 1768 ntBASIC12.84□□□□□ -0.35
CCL1P22362 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCL1P22362 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCL1P22362 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCL1P22362 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCL1P22362 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
CCL1P22362 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.83□□□□□ -0.35
CCL1P22362 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCL1P22362 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.83□□□□□ -0.35
CCL1P22362 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CCL1P22362 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCL1P22362 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CCL1P22362 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 AC139712.1-201ENST00000378256 1875 ntBASIC12.83□□□□□ -0.36
CCL1P22362 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL1P22362 AL590440.2-201ENST00000641973 1595 ntBASIC12.83□□□□□ -0.36
CCL1P22362 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CCL1P22362 POM121L8P-201ENST00000417732 1281 ntBASIC12.83□□□□□ -0.36
CCL1P22362 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL1P22362 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL1P22362 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.83□□□□□ -0.36
CCL1P22362 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL1P22362 POM121L9P-203ENST00000441984 1285 ntBASIC12.83□□□□□ -0.36
CCL1P22362 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL1P22362 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
CCL1P22362 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.83□□□□□ -0.36
CCL1P22362 CTBP2P3-201ENST00000585629 1255 ntBASIC12.83□□□□□ -0.36
CCL1P22362 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.83□□□□□ -0.36
CCL1P22362 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCL1P22362 WFDC1-204ENST00000613603 549 ntBASIC12.83□□□□□ -0.36
CCL1P22362 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL1P22362 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL1P22362 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL1P22362 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.83□□□□□ -0.36
CCL1P22362 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.83□□□□□ -0.36
CCL1P22362 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCL1P22362 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms