Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.5■□□□□ 0.07
H2AFXP16104 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.5■□□□□ 0.07
H2AFXP16104 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.5■□□□□ 0.07
H2AFXP16104 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.5■□□□□ 0.07
H2AFXP16104 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2AFXP16104 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.5■□□□□ 0.07
H2AFXP16104 AC092364.2-202ENST00000597012 1073 ntBASIC15.5■□□□□ 0.07
H2AFXP16104 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
H2AFXP16104 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
H2AFXP16104 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
H2AFXP16104 AC008267.7-201ENST00000624570 1194 ntBASIC15.5■□□□□ 0.07
H2AFXP16104 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2AFXP16104 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.5■□□□□ 0.07
H2AFXP16104 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2AFXP16104 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2AFXP16104 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2AFXP16104 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
H2AFXP16104 AC026271.4-201ENST00000578214 1833 ntBASIC15.5■□□□□ 0.07
H2AFXP16104 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
H2AFXP16104 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 TUBB8P4-201ENST00000511806 1324 ntBASIC15.49■□□□□ 0.07
H2AFXP16104 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.49■□□□□ 0.07
H2AFXP16104 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.49■□□□□ 0.07
H2AFXP16104 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.49■□□□□ 0.07
H2AFXP16104 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 AL359845.1-201ENST00000458202 1648 ntBASIC15.49■□□□□ 0.07
H2AFXP16104 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
H2AFXP16104 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.49■□□□□ 0.07
H2AFXP16104 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2AFXP16104 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2AFXP16104 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.48■□□□□ 0.07
H2AFXP16104 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 HLA-K-203ENST00000430151 1046 ntBASIC15.48■□□□□ 0.07
H2AFXP16104 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.48■□□□□ 0.07
H2AFXP16104 HNRNPDP1-201ENST00000439535 754 ntBASIC15.48■□□□□ 0.07
H2AFXP16104 SAPCD2P3-201ENST00000455031 850 ntBASIC15.48■□□□□ 0.07
H2AFXP16104 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.48■□□□□ 0.07
H2AFXP16104 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.48■□□□□ 0.07
H2AFXP16104 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.48■□□□□ 0.07
H2AFXP16104 AC099522.2-201ENST00000607001 744 ntBASIC15.48■□□□□ 0.07
H2AFXP16104 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.48■□□□□ 0.07
H2AFXP16104 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms