Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.72□□□□□ -0.53
CD28P10747 AL137783.1-201ENST00000623494 1896 ntBASIC11.72□□□□□ -0.53
CD28P10747 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD28P10747 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.71□□□□□ -0.53
CD28P10747 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 SERPINA13P-202ENST00000478994 924 ntBASIC11.71□□□□□ -0.53
CD28P10747 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 RHOQP1-201ENST00000555758 579 ntBASIC11.71□□□□□ -0.53
CD28P10747 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC11.71□□□□□ -0.53
CD28P10747 NDUFV2P1-201ENST00000596415 907 ntBASIC11.71□□□□□ -0.53
CD28P10747 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CD28P10747 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD28P10747 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.71□□□□□ -0.54
CD28P10747 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CD28P10747 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.71□□□□□ -0.54
CD28P10747 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.71□□□□□ -0.54
CD28P10747 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CD28P10747 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.71□□□□□ -0.54
CD28P10747 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CD28P10747 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CD28P10747 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 REXO1L4P-201ENST00000605109 1937 ntBASIC11.7□□□□□ -0.54
CD28P10747 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CD28P10747 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.7□□□□□ -0.54
CD28P10747 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CD28P10747 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CD28P10747 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.7□□□□□ -0.54
CD28P10747 AL354877.1-201ENST00000424412 413 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms