Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.56□□□□□ -0.08
LINGO3P0C6S8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PMS2P2-201ENST00000425039 1128 ntBASIC14.56□□□□□ -0.08
LINGO3P0C6S8 AL645939.2-201ENST00000427340 991 ntBASIC14.56□□□□□ -0.08
LINGO3P0C6S8 EEF1DP4-201ENST00000446006 880 ntBASIC14.56□□□□□ -0.08
LINGO3P0C6S8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINGO3P0C6S8 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PCDHB18P-202ENST00000526308 3197 ntBASIC14.55□□□□□ -0.08
LINGO3P0C6S8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AC107890.1-201ENST00000422478 521 ntBASIC14.55□□□□□ -0.08
LINGO3P0C6S8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AL079307.3-201ENST00000556114 283 ntBASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AC140878.1-201ENST00000565277 250 ntBASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LINGO3P0C6S8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms