Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.13■□□□□ 0.33
TPM2P07951 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 AP001972.5-201ENST00000624624 2338 ntBASIC17.13■□□□□ 0.33
TPM2P07951 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TPM2P07951 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.13■□□□□ 0.33
TPM2P07951 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TPM2P07951 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TPM2P07951 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.12■□□□□ 0.33
TPM2P07951 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 AL022342.1-201ENST00000400363 863 ntBASIC17.12■□□□□ 0.33
TPM2P07951 AL627223.1-201ENST00000416693 442 ntBASIC17.12■□□□□ 0.33
TPM2P07951 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.12■□□□□ 0.33
TPM2P07951 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.12■□□□□ 0.33
TPM2P07951 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 RN7SL828P-201ENST00000607615 303 ntBASIC17.12■□□□□ 0.33
TPM2P07951 AC007967.4-201ENST00000614700 386 ntBASIC17.12■□□□□ 0.33
TPM2P07951 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TPM2P07951 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 KRT8P12-202ENST00000472924 1397 ntBASIC17.12■□□□□ 0.33
TPM2P07951 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.12■□□□□ 0.33
TPM2P07951 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TPM2P07951 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TPM2P07951 PEG13-201ENST00000631594 5667 ntBASIC17.12■□□□□ 0.33
TPM2P07951 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TPM2P07951 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.11■□□□□ 0.33
TPM2P07951 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.11■□□□□ 0.33
TPM2P07951 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.11■□□□□ 0.33
TPM2P07951 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
TPM2P07951 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.11■□□□□ 0.33
TPM2P07951 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TPM2P07951 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TPM2P07951 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 AC073548.1-201ENST00000624088 1882 ntBASIC17.11■□□□□ 0.33
TPM2P07951 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.11■□□□□ 0.33
TPM2P07951 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TPM2P07951 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 AC106818.1-201ENST00000623223 3242 ntBASIC17.11■□□□□ 0.33
TPM2P07951 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TPM2P07951 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms