Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
APOA1P02647 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.4□□□□□ -0.26
APOA1P02647 AC140658.5-201ENST00000438532 169 ntBASIC13.4□□□□□ -0.26
APOA1P02647 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 SAPCD2P3-201ENST00000455031 850 ntBASIC13.4□□□□□ -0.26
APOA1P02647 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
APOA1P02647 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.4□□□□□ -0.26
APOA1P02647 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.4□□□□□ -0.26
APOA1P02647 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOA1P02647 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOA1P02647 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
APOA1P02647 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
APOA1P02647 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOA1P02647 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.39□□□□□ -0.27
APOA1P02647 MIR4751-201ENST00000578027 74 ntBASIC13.39□□□□□ -0.27
APOA1P02647 CLEC4GP1-201ENST00000596555 870 ntBASIC13.39□□□□□ -0.27
APOA1P02647 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
APOA1P02647 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.39□□□□□ -0.27
APOA1P02647 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 CYP4F24P-201ENST00000586049 1580 ntBASIC13.39□□□□□ -0.27
APOA1P02647 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.39□□□□□ -0.27
APOA1P02647 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
APOA1P02647 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
APOA1P02647 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.38□□□□□ -0.27
APOA1P02647 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
APOA1P02647 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOA1P02647 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms