Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TIMP1P01033 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMP1P01033 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMP1P01033 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.82■□□□□ 0.12
TIMP1P01033 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 PYY2-201ENST00000315776 282 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 ACTBP7-201ENST00000418351 1124 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.82■□□□□ 0.12
TIMP1P01033 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 AC098934.1-203ENST00000442868 1262 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TIMP1P01033 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.82■□□□□ 0.12
TIMP1P01033 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.82■□□□□ 0.12
TIMP1P01033 AL591471.1-201ENST00000621855 229 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 LINC00244-201ENST00000625073 613 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TIMP1P01033 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMP1P01033 AC087481.3-201ENST00000602886 1894 ntBASIC15.82■□□□□ 0.12
TIMP1P01033 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMP1P01033 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMP1P01033 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.81■□□□□ 0.12
TIMP1P01033 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMP1P01033 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 OR8T1P-201ENST00000421347 918 ntBASIC15.81■□□□□ 0.12
TIMP1P01033 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.81■□□□□ 0.12
TIMP1P01033 AC093826.1-201ENST00000508655 993 ntBASIC15.81■□□□□ 0.12
TIMP1P01033 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TIMP1P01033 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 AP005264.6-204ENST00000588436 719 ntBASIC15.81■□□□□ 0.12
TIMP1P01033 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.81■□□□□ 0.12
TIMP1P01033 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.81■□□□□ 0.12
TIMP1P01033 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TIMP1P01033 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TIMP1P01033 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TIMP1P01033 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms