Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 AL512638.1-201ENST00000457493 794 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 DOC2GP-202ENST00000514950 1163 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 AC093512.1-201ENST00000617969 520 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 BX539320.1-201ENST00000623759 877 ntBASIC13.56□□□□□ -0.24
PPP1R3DO95685 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.56□□□□□ -0.24
PPP1R3DO95685 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PPP1R3DO95685 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 AC092135.3-201ENST00000624151 1846 ntBASIC13.55□□□□□ -0.24
PPP1R3DO95685 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 SPDYE19P-201ENST00000338590 713 ntBASIC13.55□□□□□ -0.24
PPP1R3DO95685 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 RPL13AP25-201ENST00000484130 612 ntBASIC13.55□□□□□ -0.24
PPP1R3DO95685 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 AC093813.1-201ENST00000605066 256 ntBASIC13.55□□□□□ -0.24
PPP1R3DO95685 LINC02084-201ENST00000606069 1096 ntBASIC13.55□□□□□ -0.24
PPP1R3DO95685 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.55□□□□□ -0.24
PPP1R3DO95685 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PPP1R3DO95685 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms