Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.03■□□□□ -0
RFPL1O75677 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.03■□□□□ -0
RFPL1O75677 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 MIR658-201ENST00000385210 100 ntBASIC15.03■□□□□ -0
RFPL1O75677 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.03■□□□□ -0
RFPL1O75677 AC079776.1-201ENST00000401540 1152 ntBASIC15.03■□□□□ -0
RFPL1O75677 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 MYCLP2-201ENST00000449268 967 ntBASIC15.03■□□□□ -0
RFPL1O75677 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.03■□□□□ -0
RFPL1O75677 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.03■□□□□ -0
RFPL1O75677 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.03■□□□□ -0
RFPL1O75677 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.03■□□□□ -0
RFPL1O75677 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.03■□□□□ -0
RFPL1O75677 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.03■□□□□ -0
RFPL1O75677 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
RFPL1O75677 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.03■□□□□ -0
RFPL1O75677 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.03■□□□□ -0
RFPL1O75677 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.03■□□□□ -0
RFPL1O75677 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 AC090505.1-201ENST00000430515 1834 ntBASIC15.03■□□□□ -0
RFPL1O75677 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.03■□□□□ -0
RFPL1O75677 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RFPL1O75677 AC089987.1-201ENST00000551654 2209 ntBASIC15.02■□□□□ -0
RFPL1O75677 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.02■□□□□ -0
RFPL1O75677 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.02■□□□□ -0
RFPL1O75677 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RFPL1O75677 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.02■□□□□ -0
RFPL1O75677 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFPL1O75677 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RFPL1O75677 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 AC112492.5-201ENST00000421897 457 ntBASIC15.02■□□□□ -0
RFPL1O75677 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.02■□□□□ -0
RFPL1O75677 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.02■□□□□ -0
RFPL1O75677 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.02■□□□□ -0
RFPL1O75677 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.02■□□□□ -0
RFPL1O75677 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.02■□□□□ -0
RFPL1O75677 AC099568.2-201ENST00000609194 695 ntBASIC15.02■□□□□ -0
RFPL1O75677 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.02■□□□□ -0
RFPL1O75677 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.02■□□□□ -0
RFPL1O75677 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.02□□□□□ -0.01
RFPL1O75677 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RFPL1O75677 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RFPL1O75677 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.02□□□□□ -0.01
RFPL1O75677 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.02□□□□□ -0.01
RFPL1O75677 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RFPL1O75677 AC012617.1-204ENST00000586340 2305 ntBASIC15.01□□□□□ -0.01
RFPL1O75677 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RFPL1O75677 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RFPL1O75677 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RFPL1O75677 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms