Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 AC068418.2-201ENST00000577309 3703 ntBASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGC4Q9Y5F7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AP000593.2-201ENST00000542775 1433 ntBASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 TLE1P1-201ENST00000422965 589 ntBASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 RN7SL713P-201ENST00000582127 302 ntBASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AC073413.1-201ENST00000603927 732 ntBASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGC4Q9Y5F7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 KRT8P4-201ENST00000509735 1454 ntBASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGC4Q9Y5F7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGC4Q9Y5F7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PCDHGC4Q9Y5F7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.08■□□□□ 0
PCDHGC4Q9Y5F7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGC4Q9Y5F7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGC4Q9Y5F7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms