Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KCNIP3Q9Y2W7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AC018665.1-201ENST00000622927 1362 ntBASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SPDYE17-201ENST00000412399 783 ntBASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 FAAHP1-202ENST00000446499 1238 ntBASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AC079781.3-201ENST00000449110 356 ntBASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KCNIP3Q9Y2W7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 MEX3B-202ENST00000558133 4333 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SPCS2P4-201ENST00000436160 681 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms