Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SYNPO2Q9UMS6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 FGFR3P5-201ENST00000564496 886 ntBASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 AC124068.2-201ENST00000569473 1109 ntBASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 AC006504.5-208ENST00000588784 2401 ntBASIC16.98■□□□□ 0.31
SYNPO2Q9UMS6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC092506.1-202ENST00000401022 528 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC073150.1-201ENST00000450406 1084 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC234782.1-201ENST00000451950 919 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC116345.2-201ENST00000512837 523 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC134698.3-201ENST00000523880 214 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AC092299.1-201ENST00000632679 757 ntBASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPO2Q9UMS6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms