Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC100850.1-201ENST00000506768 649 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 MIR3615-201ENST00000581999 87 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 AL358472.3-201ENST00000608147 415 ntBASIC14.09□□□□□ -0.15
CTSFQ9UBX1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSFQ9UBX1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSFQ9UBX1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC005730.2-201ENST00000564549 1184 ntBASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC002472.3-201ENST00000640124 621 ntBASIC14.08□□□□□ -0.16
CTSFQ9UBX1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 AL138725.1-201ENST00000407347 1314 ntBASIC14.08□□□□□ -0.16
CTSFQ9UBX1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CTSFQ9UBX1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ACE3P-201ENST00000423435 1973 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AC003102.2-201ENST00000589195 1469 ntBASIC14.07□□□□□ -0.16
CTSFQ9UBX1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSFQ9UBX1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms