Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 AC004890.2-204ENST00000481968 304 ntBASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 TPRX2P-201ENST00000535362 881 ntBASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 AL390754.1-201ENST00000619088 582 ntBASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 BX539320.1-201ENST00000623759 877 ntBASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 AL157414.3-201ENST00000624276 1954 ntBASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
THUMPD1Q9NXG2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 AL359881.3-201ENST00000602640 1721 ntBASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 DOC2GP-202ENST00000514950 1163 ntBASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 DUX4L27-201ENST00000554796 1261 ntBASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 AC008738.7-201ENST00000609744 511 ntBASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 AC004840.1-201ENST00000636359 365 ntBASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
THUMPD1Q9NXG2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 BASP1P1-201ENST00000430708 665 ntBASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
THUMPD1Q9NXG2 AC023511.2-201ENST00000618803 211 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms