Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 TLE1P1-201ENST00000422965 589 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 AL589987.1-201ENST00000453380 819 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 VDAC1P7-201ENST00000462417 847 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 RN7SL399P-201ENST00000471648 279 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 AC022616.1-201ENST00000518688 554 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.7□□□□□ -0.54
TRGV9Q99603 IGHV3-42-201ENST00000520410 361 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 AC009407.1-201ENST00000568958 598 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.7□□□□□ -0.54
TRGV9Q99603 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.7□□□□□ -0.54
TRGV9Q99603 AC092364.2-202ENST00000597012 1073 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 AL662799.1-202ENST00000614205 422 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.7□□□□□ -0.54
TRGV9Q99603 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.7□□□□□ -0.54
TRGV9Q99603 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 AC090505.1-201ENST00000430515 1834 ntBASIC11.7□□□□□ -0.54
TRGV9Q99603 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRGV9Q99603 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 MIR943-201ENST00000401286 94 ntBASIC11.69□□□□□ -0.54
TRGV9Q99603 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV9Q99603 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
TRGV9Q99603 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV9Q99603 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 INE2-201ENST00000630399 1874 ntBASIC11.69□□□□□ -0.54
TRGV9Q99603 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TRGV9Q99603 TCAM1P-207ENST00000485295 1537 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms