Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AL732292.2-201ENST00000609649 430 ntBASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 MIR1199-201ENST00000621445 119 ntBASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AC012313.10-201ENST00000623509 926 ntBASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 CSPG4P11-201ENST00000560634 4910 ntBASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB3IPQ96QF0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 LINC01711-201ENST00000598340 967 ntBASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 AP002761.4-201ENST00000565433 3361 ntBASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAB3IPQ96QF0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IPQ96QF0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms