Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.25■□□□□ 0.51
RPGRQ92834 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
RPGRQ92834 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RPGRQ92834 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPGRQ92834 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.24■□□□□ 0.51
RPGRQ92834 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RPGRQ92834 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RPGRQ92834 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.24■□□□□ 0.51
RPGRQ92834 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RPGRQ92834 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.24■□□□□ 0.51
RPGRQ92834 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.24■□□□□ 0.51
RPGRQ92834 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 DNM1P30-201ENST00000563586 452 ntBASIC18.24■□□□□ 0.51
RPGRQ92834 AC093752.3-201ENST00000567343 901 ntBASIC18.24■□□□□ 0.51
RPGRQ92834 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 C18orf15-201ENST00000623680 2534 ntBASIC18.24■□□□□ 0.51
RPGRQ92834 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RPGRQ92834 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.24■□□□□ 0.51
RPGRQ92834 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RPGRQ92834 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPGRQ92834 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RPGRQ92834 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 TMBIM7P-202ENST00000641474 1516 ntBASIC18.23■□□□□ 0.51
RPGRQ92834 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RPGRQ92834 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.23■□□□□ 0.51
RPGRQ92834 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 KRT18P36-201ENST00000411618 1276 ntBASIC18.23■□□□□ 0.51
RPGRQ92834 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.23■□□□□ 0.51
RPGRQ92834 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.23■□□□□ 0.51
RPGRQ92834 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.23■□□□□ 0.51
RPGRQ92834 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RPGRQ92834 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.23■□□□□ 0.51
RPGRQ92834 AC009084.3-201ENST00000623356 437 ntBASIC18.23■□□□□ 0.51
RPGRQ92834 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.23■□□□□ 0.51
RPGRQ92834 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 AC026691.1-201ENST00000602502 2017 ntBASIC18.23■□□□□ 0.51
RPGRQ92834 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RPGRQ92834 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.23■□□□□ 0.51
RPGRQ92834 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RPGRQ92834 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPGRQ92834 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 MROH4P-201ENST00000431302 1578 ntBASIC18.22■□□□□ 0.51
RPGRQ92834 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 WASH3P-207ENST00000560956 1394 ntBASIC18.22■□□□□ 0.51
RPGRQ92834 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 RNA5SP359-201ENST00000364838 113 ntBASIC18.22■□□□□ 0.51
RPGRQ92834 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.22■□□□□ 0.51
RPGRQ92834 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RPGRQ92834 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPGRQ92834 BANF1P3-201ENST00000412556 261 ntBASIC18.22■□□□□ 0.51
RPGRQ92834 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms