Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC023968.2-201ENST00000560593 1049 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 LINC00244-201ENST00000625073 613 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 AC010491.1-201ENST00000563101 2797 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 RN7SL788P-201ENST00000460504 316 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 RN7SL767P-201ENST00000493013 295 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 NDUFB10P1-201ENST00000567319 521 ntBASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 PHF23-213ENST00000613632 850 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
ALMS1Q8TCU4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 AC020931.1-201ENST00000589622 1346 ntBASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 EEF1DP2-201ENST00000433698 843 ntBASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 AC016582.2-202ENST00000587765 1094 ntBASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
ALMS1Q8TCU4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 FAM197Y6-201ENST00000420524 766 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 AC025594.1-201ENST00000469533 543 ntBASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC9.7□□□□□ -0.86
ALMS1Q8TCU4 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms