Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC134312.5-201ENST00000568031 1313 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 MSTO2P-201ENST00000314835 1709 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 BX640514.1-201ENST00000583223 1918 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AL354702.1-201ENST00000442006 1960 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NUP43Q8NFH3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 BAATP1-201ENST00000412284 1225 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC012441.1-201ENST00000446669 685 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 TDH-203ENST00000531764 1110 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 MIR3197-201ENST00000582241 73 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC027307.3-201ENST00000594262 1100 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC010319.3-201ENST00000597028 470 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC004466.1-201ENST00000599515 1080 ntBASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.02□□□□□ -0.17
NUP43Q8NFH3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NUP43Q8NFH3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms