Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AL035456.1-201ENST00000456064 1369 ntBASIC15.04■□□□□ -0
TRIM42Q8IWZ5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AC015922.1-201ENST00000421102 1152 ntBASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM42Q8IWZ5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AC131212.3-201ENST00000624087 4219 ntBASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AL360270.3-201ENST00000609118 1348 ntBASIC15.03■□□□□ -0
TRIM42Q8IWZ5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 ALG1L8P-201ENST00000533887 760 ntBASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 RN7SL828P-201ENST00000607615 303 ntBASIC15.03■□□□□ -0
TRIM42Q8IWZ5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 AGGF1P1-201ENST00000509500 2073 ntBASIC15.03■□□□□ -0
TRIM42Q8IWZ5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM42Q8IWZ5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM42Q8IWZ5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms