Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 AC087499.6-201ENST00000411576 835 ntBASIC13.87□□□□□ -0.19
VRK2Q86Y07 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CTBP2P3-201ENST00000585629 1255 ntBASIC13.87□□□□□ -0.19
VRK2Q86Y07 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 HSPA7-201ENST00000445535 1927 ntBASIC13.87□□□□□ -0.19
VRK2Q86Y07 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK2Q86Y07 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK2Q86Y07 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 AC067750.1-201ENST00000608826 6545 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CLUHP6-201ENST00000580789 941 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 RN7SL204P-201ENST00000582831 262 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 AC008494.3-201ENST00000606615 944 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 AP005019.2-201ENST00000615104 511 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 GRK6P1-201ENST00000400595 1711 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 ST20-AS1-201ENST00000560255 4223 ntBASIC13.86□□□□□ -0.19
VRK2Q86Y07 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.86□□□□□ -0.19
VRK2Q86Y07 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VRK2Q86Y07 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms