Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC27Q2M243 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC27Q2M243 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 MIR326-201ENST00000362220 95 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 AL035414.1-201ENST00000451327 857 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 BNIP3P42-201ENST00000454982 569 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 AL583810.1-201ENST00000553344 1045 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC132192.2-201ENST00000596206 1147 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 BNIP3P29-201ENST00000598302 571 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 AL136301.1-201ENST00000615830 422 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC011447.5-201ENST00000616168 564 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC244157.2-201ENST00000616239 1006 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC027601.3-201ENST00000622907 509 ntBASIC19.34■□□□□ 0.69
CCDC27Q2M243 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC27Q2M243 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC27Q2M243 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC27Q2M243 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 AC090505.1-201ENST00000430515 1834 ntBASIC19.33■□□□□ 0.69
CCDC27Q2M243 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC19.33■□□□□ 0.69
CCDC27Q2M243 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
CCDC27Q2M243 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC27Q2M243 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 DUX4L46-201ENST00000566845 751 ntBASIC19.33■□□□□ 0.68
CCDC27Q2M243 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 AC009093.10-201ENST00000641956 1442 ntBASIC19.33■□□□□ 0.68
CCDC27Q2M243 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC27Q2M243 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC27Q2M243 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AC215219.1-201ENST00000400706 1817 ntBASIC19.32■□□□□ 0.68
CCDC27Q2M243 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AP002414.2-201ENST00000591780 3365 ntBASIC19.32■□□□□ 0.68
CCDC27Q2M243 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC27Q2M243 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC27Q2M243 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms