Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 AC013355.1-201ENST00000562625 723 ntBASIC17.91■□□□□ 0.46
RFX7Q2KHR2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 BNIP3P13-201ENST00000599968 566 ntBASIC17.91■□□□□ 0.46
RFX7Q2KHR2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFX7Q2KHR2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AC139712.1-201ENST00000378256 1875 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 BX640514.1-201ENST00000583223 1918 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AP001267.2-201ENST00000532619 2086 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 DPM3-202ENST00000368399 517 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AC008825.2-201ENST00000603374 718 ntBASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFX7Q2KHR2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.89■□□□□ 0.46
RFX7Q2KHR2 KRT8P29-201ENST00000420409 1371 ntBASIC17.89■□□□□ 0.45
RFX7Q2KHR2 KRT8P28-201ENST00000433288 1390 ntBASIC17.89■□□□□ 0.45
RFX7Q2KHR2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 AC091812.3-201ENST00000621362 345 ntBASIC17.89■□□□□ 0.45
RFX7Q2KHR2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFX7Q2KHR2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms