Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 AC063926.3-201ENST00000624734 5658 ntBASIC16.42■□□□□ 0.22
NFX1Q12986 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 RN7SKP175-201ENST00000408472 289 ntBASIC16.42■□□□□ 0.22
NFX1Q12986 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.42■□□□□ 0.22
NFX1Q12986 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.42■□□□□ 0.22
NFX1Q12986 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
NFX1Q12986 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.42■□□□□ 0.22
NFX1Q12986 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.42■□□□□ 0.22
NFX1Q12986 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.42■□□□□ 0.22
NFX1Q12986 AC106872.11-201ENST00000605838 421 ntBASIC16.42■□□□□ 0.22
NFX1Q12986 AL358472.3-201ENST00000608147 415 ntBASIC16.42■□□□□ 0.22
NFX1Q12986 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.42■□□□□ 0.22
NFX1Q12986 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
NFX1Q12986 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.42■□□□□ 0.22
NFX1Q12986 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFX1Q12986 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 SPTLC1P5-201ENST00000450718 252 ntBASIC16.41■□□□□ 0.22
NFX1Q12986 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.41■□□□□ 0.22
NFX1Q12986 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 RNA5SP423-201ENST00000517127 109 ntBASIC16.41■□□□□ 0.22
NFX1Q12986 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.41■□□□□ 0.22
NFX1Q12986 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.41■□□□□ 0.22
NFX1Q12986 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.41■□□□□ 0.22
NFX1Q12986 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
NFX1Q12986 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.41■□□□□ 0.22
NFX1Q12986 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFX1Q12986 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.4■□□□□ 0.22
NFX1Q12986 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NFX1Q12986 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NFX1Q12986 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFX1Q12986 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFX1Q12986 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFX1Q12986 AC011840.2-201ENST00000563063 1520 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms