Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
EFNB1P98172 AC107918.4-201ENST00000641966 3141 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.35□□□□□ -0.27
EFNB1P98172 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
EFNB1P98172 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
EFNB1P98172 AC111170.3-201ENST00000624282 2464 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 AC015688.4-201ENST00000580780 1647 ntBASIC13.35□□□□□ -0.27
EFNB1P98172 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.35□□□□□ -0.27
EFNB1P98172 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
EFNB1P98172 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
EFNB1P98172 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
EFNB1P98172 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.34□□□□□ -0.27
EFNB1P98172 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 AC004945.1-201ENST00000416738 983 ntBASIC13.34□□□□□ -0.27
EFNB1P98172 AC107890.1-201ENST00000422478 521 ntBASIC13.34□□□□□ -0.27
EFNB1P98172 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.34□□□□□ -0.27
EFNB1P98172 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.34□□□□□ -0.27
EFNB1P98172 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 AC036164.1-201ENST00000570544 333 ntBASIC13.34□□□□□ -0.27
EFNB1P98172 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.34□□□□□ -0.27
EFNB1P98172 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNB1P98172 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNB1P98172 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
EFNB1P98172 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.34□□□□□ -0.27
EFNB1P98172 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.34□□□□□ -0.27
EFNB1P98172 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
EFNB1P98172 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
EFNB1P98172 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.33□□□□□ -0.27
EFNB1P98172 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.33□□□□□ -0.27
EFNB1P98172 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
EFNB1P98172 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 AC015909.5-201ENST00000624336 2266 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.33□□□□□ -0.28
EFNB1P98172 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
EFNB1P98172 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.33□□□□□ -0.28
EFNB1P98172 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 GCOM2-201ENST00000509133 1104 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNB1P98172 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNB1P98172 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNB1P98172 SPDYE22P-201ENST00000582158 798 ntBASIC13.33□□□□□ -0.28
EFNB1P98172 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.33□□□□□ -0.28
EFNB1P98172 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
EFNB1P98172 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
EFNB1P98172 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB1P98172 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms