Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CLDN12P56749 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 AC004899.2-201ENST00000622993 3860 ntBASIC13.09□□□□□ -0.31
CLDN12P56749 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 PPT1-213ENST00000641319 2388 ntBASIC13.09□□□□□ -0.31
CLDN12P56749 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLDN12P56749 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDN12P56749 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLDN12P56749 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDN12P56749 AL035456.1-201ENST00000456064 1369 ntBASIC13.08□□□□□ -0.31
CLDN12P56749 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.08□□□□□ -0.31
CLDN12P56749 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN12P56749 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CLDN12P56749 HTR5BP-201ENST00000430851 1154 ntBASIC13.08□□□□□ -0.32
CLDN12P56749 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN12P56749 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.08□□□□□ -0.32
CLDN12P56749 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.08□□□□□ -0.32
CLDN12P56749 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 AC105339.1-204ENST00000636249 355 ntBASIC13.08□□□□□ -0.32
CLDN12P56749 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CLDN12P56749 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLDN12P56749 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.08□□□□□ -0.32
CLDN12P56749 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.07□□□□□ -0.32
CLDN12P56749 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 SPDYE14P-201ENST00000442619 822 ntBASIC13.07□□□□□ -0.32
CLDN12P56749 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.07□□□□□ -0.32
CLDN12P56749 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.07□□□□□ -0.32
CLDN12P56749 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.07□□□□□ -0.32
CLDN12P56749 AC093520.2-201ENST00000561830 333 ntBASIC13.07□□□□□ -0.32
CLDN12P56749 MIR4453-201ENST00000584019 89 ntBASIC13.07□□□□□ -0.32
CLDN12P56749 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CLDN12P56749 AL589739.1-201ENST00000607720 493 ntBASIC13.07□□□□□ -0.32
CLDN12P56749 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLDN12P56749 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms