Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TPT1P11-201ENST00000458482 498 ntBASIC14.69□□□□□ -0.06
CDH13P55290 AC022447.6-201ENST00000515522 438 ntBASIC14.69□□□□□ -0.06
CDH13P55290 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH13P55290 AC005498.2-205ENST00000593218 784 ntBASIC14.69□□□□□ -0.06
CDH13P55290 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH13P55290 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 BX539320.1-201ENST00000623759 877 ntBASIC14.69□□□□□ -0.06
CDH13P55290 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH13P55290 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CDH13P55290 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH13P55290 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 RPL13AP25-201ENST00000484130 612 ntBASIC14.68□□□□□ -0.06
CDH13P55290 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH13P55290 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CDH13P55290 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CDH13P55290 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CDH13P55290 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH13P55290 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH13P55290 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.67□□□□□ -0.06
CDH13P55290 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDH13P55290 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDH13P55290 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms