Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 C8orf49-201ENST00000525043 1968 ntBASIC16.84■□□□□ 0.29
USP11P51784 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
USP11P51784 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.84■□□□□ 0.29
USP11P51784 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP11P51784 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
USP11P51784 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
USP11P51784 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
USP11P51784 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
USP11P51784 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
USP11P51784 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.83■□□□□ 0.28
USP11P51784 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USP11P51784 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
USP11P51784 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 MIR1908-201ENST00000410394 80 ntBASIC16.83■□□□□ 0.28
USP11P51784 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.83■□□□□ 0.28
USP11P51784 MTX1P1-201ENST00000440904 838 ntBASIC16.83■□□□□ 0.28
USP11P51784 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
USP11P51784 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.83■□□□□ 0.28
USP11P51784 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
USP11P51784 AC103988.2-201ENST00000561804 725 ntBASIC16.83■□□□□ 0.28
USP11P51784 DUX4L46-201ENST00000566845 751 ntBASIC16.83■□□□□ 0.28
USP11P51784 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.83■□□□□ 0.28
USP11P51784 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.83■□□□□ 0.28
USP11P51784 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 AC067930.6-201ENST00000623257 4947 ntBASIC16.83■□□□□ 0.28
USP11P51784 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.83■□□□□ 0.28
USP11P51784 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
USP11P51784 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.83■□□□□ 0.28
USP11P51784 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.83■□□□□ 0.28
USP11P51784 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP11P51784 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AL354702.1-201ENST00000442006 1960 ntBASIC16.82■□□□□ 0.28
USP11P51784 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 NORAD-201ENST00000565493 5339 ntBASIC16.82■□□□□ 0.28
USP11P51784 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.82■□□□□ 0.28
USP11P51784 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 MIR326-201ENST00000362220 95 ntBASIC16.82■□□□□ 0.28
USP11P51784 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AL354877.1-201ENST00000424412 413 ntBASIC16.82■□□□□ 0.28
USP11P51784 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 HSPB1P2-201ENST00000448722 546 ntBASIC16.82■□□□□ 0.28
USP11P51784 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AL035414.1-201ENST00000451327 857 ntBASIC16.82■□□□□ 0.28
USP11P51784 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.82■□□□□ 0.28
USP11P51784 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.82■□□□□ 0.28
USP11P51784 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
USP11P51784 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP11P51784 AC027601.3-201ENST00000622907 509 ntBASIC16.82■□□□□ 0.28
USP11P51784 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
USP11P51784 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP11P51784 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP11P51784 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP11P51784 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms