Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC21.75■■□□□ 1.07
KDM5CP41229 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
KDM5CP41229 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KDM5CP41229 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.75■■□□□ 1.07
KDM5CP41229 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 AC021305.1-201ENST00000520656 1514 ntBASIC21.75■■□□□ 1.07
KDM5CP41229 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.75■■□□□ 1.07
KDM5CP41229 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KDM5CP41229 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC21.75■■□□□ 1.07
KDM5CP41229 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC21.74■■□□□ 1.07
KDM5CP41229 SCARNA12-201ENST00000459155 270 ntBASIC21.74■■□□□ 1.07
KDM5CP41229 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 ABHD17AP9-201ENST00000561925 548 ntBASIC21.74■■□□□ 1.07
KDM5CP41229 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 MIR6746-201ENST00000620971 63 ntBASIC21.74■■□□□ 1.07
KDM5CP41229 AC022532.1-201ENST00000624563 1728 ntBASIC21.74■■□□□ 1.07
KDM5CP41229 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.74■■□□□ 1.07
KDM5CP41229 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 KRT8P2-201ENST00000556193 944 ntBASIC21.74■■□□□ 1.07
KDM5CP41229 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KDM5CP41229 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC21.74■■□□□ 1.07
KDM5CP41229 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
KDM5CP41229 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC21.73■■□□□ 1.07
KDM5CP41229 AC092384.3-202ENST00000564646 2873 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
KDM5CP41229 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC21.73■■□□□ 1.07
KDM5CP41229 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC21.73■■□□□ 1.07
KDM5CP41229 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
KDM5CP41229 AGGF1P1-201ENST00000509500 2073 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KDM5CP41229 AL109954.1-202ENST00000564051 2148 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.73■■□□□ 1.07
KDM5CP41229 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.73■■□□□ 1.07
KDM5CP41229 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 PTGER4P2-201ENST00000328411 252 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.73■■□□□ 1.07
KDM5CP41229 PTGER4P3-201ENST00000458150 252 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 AC013553.1-201ENST00000560906 267 ntBASIC21.73■■□□□ 1.07
KDM5CP41229 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC21.73■■□□□ 1.07
KDM5CP41229 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.73■■□□□ 1.07
KDM5CP41229 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
KDM5CP41229 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDM5CP41229 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 API5-203ENST00000455725 2257 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KDM5CP41229 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDM5CP41229 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC21.72■■□□□ 1.07
KDM5CP41229 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC21.72■■□□□ 1.07
KDM5CP41229 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
KDM5CP41229 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms