Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
HOXC6P09630 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.72■□□□□ 0.27
HOXC6P09630 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HOXC6P09630 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 AC007292.2-201ENST00000593524 1812 ntBASIC16.71■□□□□ 0.27
HOXC6P09630 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC6P09630 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HOXC6P09630 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC6P09630 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.71■□□□□ 0.27
HOXC6P09630 DUTP3-201ENST00000450025 415 ntBASIC16.71■□□□□ 0.27
HOXC6P09630 CHCHD2P9-201ENST00000461726 456 ntBASIC16.71■□□□□ 0.27
HOXC6P09630 AC093752.3-201ENST00000567343 901 ntBASIC16.71■□□□□ 0.27
HOXC6P09630 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.71■□□□□ 0.27
HOXC6P09630 AC009560.1-201ENST00000620208 434 ntBASIC16.71■□□□□ 0.27
HOXC6P09630 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.71■□□□□ 0.27
HOXC6P09630 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HOXC6P09630 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HOXC6P09630 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
HOXC6P09630 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
HOXC6P09630 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.71■□□□□ 0.26
HOXC6P09630 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HOXC6P09630 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HOXC6P09630 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 AL583805.1-201ENST00000391389 531 ntBASIC16.7■□□□□ 0.26
HOXC6P09630 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.7■□□□□ 0.26
HOXC6P09630 TSPY25P-201ENST00000429463 745 ntBASIC16.7■□□□□ 0.26
HOXC6P09630 IGHV3-37-201ENST00000518544 340 ntBASIC16.7■□□□□ 0.26
HOXC6P09630 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HOXC6P09630 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
HOXC6P09630 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HOXC6P09630 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 AC018629.1-201ENST00000623381 1736 ntBASIC16.7■□□□□ 0.26
HOXC6P09630 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HOXC6P09630 KRT8P31-201ENST00000504812 1408 ntBASIC16.7■□□□□ 0.26
HOXC6P09630 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HOXC6P09630 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HOXC6P09630 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms