Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
APOA1P02647 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.42□□□□□ -0.26
APOA1P02647 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.42□□□□□ -0.26
APOA1P02647 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.42□□□□□ -0.26
APOA1P02647 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.42□□□□□ -0.26
APOA1P02647 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOA1P02647 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
APOA1P02647 AC068760.1-201ENST00000493579 1953 ntBASIC13.41□□□□□ -0.26
APOA1P02647 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 AC010336.1-201ENST00000539278 4739 ntBASIC13.41□□□□□ -0.26
APOA1P02647 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.41□□□□□ -0.26
APOA1P02647 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.41□□□□□ -0.26
APOA1P02647 AC136604.1-201ENST00000418535 575 ntBASIC13.41□□□□□ -0.26
APOA1P02647 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.41□□□□□ -0.26
APOA1P02647 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
APOA1P02647 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.41□□□□□ -0.26
APOA1P02647 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.41□□□□□ -0.26
APOA1P02647 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 AC073389.1-201ENST00000595595 795 ntBASIC13.41□□□□□ -0.26
APOA1P02647 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.41□□□□□ -0.26
APOA1P02647 SPTSSB-204ENST00000617024 1292 ntBASIC13.41□□□□□ -0.26
APOA1P02647 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 PCDHB18P-202ENST00000526308 3197 ntBASIC13.41□□□□□ -0.26
APOA1P02647 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
APOA1P02647 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 AC073869.1-201ENST00000415574 2762 ntBASIC13.41□□□□□ -0.26
APOA1P02647 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.41□□□□□ -0.26
APOA1P02647 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
APOA1P02647 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
APOA1P02647 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms