Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-2O95096 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 FAM8A4P-201ENST00000435433 1213 ntBASIC13.78□□□□□ -0.2
NKX2-2O95096 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 AP003171.2-201ENST00000528208 925 ntBASIC13.78□□□□□ -0.2
NKX2-2O95096 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.78□□□□□ -0.2
NKX2-2O95096 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.78□□□□□ -0.2
NKX2-2O95096 AP001002.3-201ENST00000623482 206 ntBASIC13.78□□□□□ -0.2
NKX2-2O95096 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX2-2O95096 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-2O95096 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX2-2O95096 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX2-2O95096 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-2O95096 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
NKX2-2O95096 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-2O95096 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.77□□□□□ -0.2
NKX2-2O95096 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-2O95096 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX2-2O95096 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC006001.1-201ENST00000325130 474 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.77□□□□□ -0.21
NKX2-2O95096 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
NKX2-2O95096 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX2-2O95096 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NKX2-2O95096 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX2-2O95096 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC106886.1-201ENST00000568660 600 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 AC068418.2-201ENST00000577309 3703 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX2-2O95096 OR10B1P-201ENST00000601666 907 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC138951.2-201ENST00000623455 1161 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NKX2-2O95096 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 AC026748.1-201ENST00000624349 3251 ntBASIC13.77□□□□□ -0.21
NKX2-2O95096 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX2-2O95096 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX2-2O95096 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NKX2-2O95096 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX2-2O95096 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX2-2O95096 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms