Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM14DP-201ENST00000422205 345 ntBASIC14.09□□□□□ -0.15
HCN1O60741 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.09□□□□□ -0.15
HCN1O60741 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.09□□□□□ -0.15
HCN1O60741 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.09□□□□□ -0.15
HCN1O60741 PTP4A1P2-201ENST00000546033 454 ntBASIC14.09□□□□□ -0.15
HCN1O60741 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.09□□□□□ -0.15
HCN1O60741 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.09□□□□□ -0.15
HCN1O60741 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.09□□□□□ -0.15
HCN1O60741 MIR5189-201ENST00000577370 114 ntBASIC14.09□□□□□ -0.15
HCN1O60741 AC015910.1-201ENST00000579400 975 ntBASIC14.09□□□□□ -0.15
HCN1O60741 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 AC093813.1-201ENST00000605066 256 ntBASIC14.09□□□□□ -0.15
HCN1O60741 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
HCN1O60741 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HCN1O60741 AC007686.3-201ENST00000619017 3487 ntBASIC14.09□□□□□ -0.15
HCN1O60741 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.09□□□□□ -0.15
HCN1O60741 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
HCN1O60741 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HCN1O60741 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HCN1O60741 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.08□□□□□ -0.15
HCN1O60741 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
HCN1O60741 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HCN1O60741 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
HCN1O60741 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
HCN1O60741 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.08□□□□□ -0.16
HCN1O60741 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.08□□□□□ -0.16
HCN1O60741 GHSR-202ENST00000427970 912 ntBASIC14.08□□□□□ -0.16
HCN1O60741 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 USP32P1-208ENST00000506594 1164 ntBASIC14.08□□□□□ -0.16
HCN1O60741 AC026410.3-201ENST00000514280 936 ntBASIC14.08□□□□□ -0.16
HCN1O60741 SLC25A47P1-201ENST00000531577 414 ntBASIC14.08□□□□□ -0.16
HCN1O60741 TDH-203ENST00000531764 1110 ntBASIC14.08□□□□□ -0.16
HCN1O60741 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.08□□□□□ -0.16
HCN1O60741 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 AL512343.1-201ENST00000605837 169 ntBASIC14.08□□□□□ -0.16
HCN1O60741 AL022328.1-201ENST00000610050 478 ntBASIC14.08□□□□□ -0.16
HCN1O60741 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RPSAP52-203ENST00000622976 1023 ntBASIC14.08□□□□□ -0.16
HCN1O60741 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.08□□□□□ -0.16
HCN1O60741 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HCN1O60741 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 AC005252.3-201ENST00000623855 2258 ntBASIC14.08□□□□□ -0.16
HCN1O60741 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HCN1O60741 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HCN1O60741 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms