Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AL513477.1-201ENST00000602865 2407 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NUS1P3-201ENST00000423502 862 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 FAM207CP-201ENST00000443486 507 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 SPTLC1P1-201ENST00000447199 261 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MYCLP2-201ENST00000449268 967 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 GAPDHP40-201ENST00000505218 1006 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 BRI3BPP1-201ENST00000594224 787 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 LINC02560-201ENST00000596379 459 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AC133539.2-201ENST00000604757 467 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AL662799.1-202ENST00000614205 422 ntBASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC10.93□□□□□ -0.66
TRGV1A0A0A0MS02 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms