Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 AC092865.7-201ENST00000641832 219 ntBASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
LINC01558Q9Y6Z2 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LINC01558Q9Y6Z2 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC006037.2-201ENST00000622975 2232 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 RN7SL832P-201ENST00000607781 1756 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 FAAHP1-202ENST00000446499 1238 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AL121672.3-201ENST00000608644 468 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AL050303.2-201ENST00000619798 666 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 AL157996.1-201ENST00000624684 2299 ntBASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LINC01558Q9Y6Z2 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms