Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
BRMS1Q9HCU9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC018529.2-202ENST00000611482 3087 ntBASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 RN7SL837P-201ENST00000463010 287 ntBASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC007292.2-201ENST00000593524 1812 ntBASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 AC007686.3-201ENST00000619017 3487 ntBASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.34■□□□□ 0.37
BRMS1Q9HCU9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 SNX18-202ENST00000343017 3140 ntBASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
BRMS1Q9HCU9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 AL596325.1-201ENST00000563991 1082 ntBASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRMS1Q9HCU9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms