Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AC120045.2-201ENST00000567334 178 ntBASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AL662799.1-202ENST00000614205 422 ntBASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AC232323.1-201ENST00000540724 2099 ntBASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 REXO1L5P-201ENST00000622260 2098 ntBASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC68Q9H2F9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 SOCS2P1-201ENST00000417727 557 ntBASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AL442647.2-201ENST00000429864 857 ntBASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TSPY16P-201ENST00000449843 468 ntBASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AC123567.1-201ENST00000548294 1261 ntBASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 AL132655.2-201ENST00000596276 594 ntBASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC68Q9H2F9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AC007541.1-201ENST00000570282 1469 ntBASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC68Q9H2F9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms