Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AC016397.2-201ENST00000624848 1985 ntBASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.08□□□□□ -0.16
AMBRA1Q9C0C7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 PTENP1-202ENST00000532280 3996 ntBASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
AMBRA1Q9C0C7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AL354702.1-201ENST00000442006 1960 ntBASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC004066.1-201ENST00000502488 802 ntBASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC005225.4-201ENST00000557330 545 ntBASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.06□□□□□ -0.16
AMBRA1Q9C0C7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms