Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 MYCLP2-201ENST00000449268 967 ntBASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXP3Q9BZS1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXP3Q9BZS1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AC117489.1-201ENST00000625169 3217 ntBASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXP3Q9BZS1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 AL365209.1-201ENST00000624418 6473 ntBASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 AGGF1P1-201ENST00000509500 2073 ntBASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXP3Q9BZS1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms